Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk3bQ80YF6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Upk3bQ80YF6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk3bQ80YF6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk3bQ80YF6 Gm44428-201ENSMUST00000204474 874 ntBASIC17.99■□□□□ 0.47
Upk3bQ80YF6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk3bQ80YF6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk3bQ80YF6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk3bQ80YF6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk3bQ80YF6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Upk3bQ80YF6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.98■□□□□ 0.47
Upk3bQ80YF6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk3bQ80YF6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk3bQ80YF6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Upk3bQ80YF6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk3bQ80YF6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk3bQ80YF6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk3bQ80YF6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk3bQ80YF6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Upk3bQ80YF6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk3bQ80YF6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk3bQ80YF6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk3bQ80YF6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Upk3bQ80YF6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk3bQ80YF6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk3bQ80YF6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk3bQ80YF6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk3bQ80YF6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Upk3bQ80YF6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Upk3bQ80YF6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk3bQ80YF6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upk3bQ80YF6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upk3bQ80YF6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upk3bQ80YF6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upk3bQ80YF6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Upk3bQ80YF6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Upk3bQ80YF6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.91■□□□□ 0.46
Upk3bQ80YF6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Upk3bQ80YF6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upk3bQ80YF6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.91■□□□□ 0.46
Upk3bQ80YF6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.91■□□□□ 0.46
Upk3bQ80YF6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Upk3bQ80YF6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upk3bQ80YF6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.9■□□□□ 0.46
Upk3bQ80YF6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk3bQ80YF6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upk3bQ80YF6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk3bQ80YF6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms