Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3tc2Q80VA5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.2■■□□□ 1.3
Sh3tc2Q80VA5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3tc2Q80VA5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3tc2Q80VA5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.2■■□□□ 1.3
Sh3tc2Q80VA5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3tc2Q80VA5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.19■■□□□ 1.3
Sh3tc2Q80VA5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3tc2Q80VA5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3tc2Q80VA5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3tc2Q80VA5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Sh3tc2Q80VA5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3tc2Q80VA5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3tc2Q80VA5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3tc2Q80VA5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3tc2Q80VA5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3tc2Q80VA5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3tc2Q80VA5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3tc2Q80VA5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3tc2Q80VA5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3tc2Q80VA5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.15■■□□□ 1.3
Sh3tc2Q80VA5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Sh3tc2Q80VA5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3tc2Q80VA5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3tc2Q80VA5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3tc2Q80VA5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Gm12821-201ENSMUST00000120022 600 ntBASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Gm27454-201ENSMUST00000185090 204 ntBASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.14■■□□□ 1.29
Sh3tc2Q80VA5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Gm45417-201ENSMUST00000209533 758 ntBASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3tc2Q80VA5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Sh3tc2Q80VA5 Gm10399-202ENSMUST00000202768 748 ntBASIC23.12■■□□□ 1.29
Sh3tc2Q80VA5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3tc2Q80VA5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Sh3tc2Q80VA5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3tc2Q80VA5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3tc2Q80VA5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.1■■□□□ 1.29
Sh3tc2Q80VA5 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.1■■□□□ 1.29
Sh3tc2Q80VA5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3tc2Q80VA5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Sh3tc2Q80VA5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3tc2Q80VA5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3tc2Q80VA5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3tc2Q80VA5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3tc2Q80VA5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3tc2Q80VA5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3tc2Q80VA5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3tc2Q80VA5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3tc2Q80VA5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sh3tc2Q80VA5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sh3tc2Q80VA5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Sh3tc2Q80VA5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3tc2Q80VA5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3tc2Q80VA5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3tc2Q80VA5 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.06■■□□□ 1.28
Sh3tc2Q80VA5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3tc2Q80VA5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3tc2Q80VA5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3tc2Q80VA5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms