Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.78■□□□□ 0.92
Scn4bQ7M729 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn4bQ7M729 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn4bQ7M729 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn4bQ7M729 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn4bQ7M729 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn4bQ7M729 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn4bQ7M729 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn4bQ7M729 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn4bQ7M729 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn4bQ7M729 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn4bQ7M729 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn4bQ7M729 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn4bQ7M729 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn4bQ7M729 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Scn4bQ7M729 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn4bQ7M729 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn4bQ7M729 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.76■□□□□ 0.91
Scn4bQ7M729 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Scn4bQ7M729 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn4bQ7M729 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn4bQ7M729 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn4bQ7M729 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn4bQ7M729 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn4bQ7M729 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scn4bQ7M729 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn4bQ7M729 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn4bQ7M729 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn4bQ7M729 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.74■□□□□ 0.91
Scn4bQ7M729 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn4bQ7M729 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn4bQ7M729 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn4bQ7M729 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn4bQ7M729 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.73■□□□□ 0.91
Scn4bQ7M729 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn4bQ7M729 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Scn4bQ7M729 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn4bQ7M729 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn4bQ7M729 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Scn4bQ7M729 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn4bQ7M729 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn4bQ7M729 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn4bQ7M729 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.72■□□□□ 0.91
Scn4bQ7M729 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Scn4bQ7M729 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.71■□□□□ 0.91
Scn4bQ7M729 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.7■□□□□ 0.9
Scn4bQ7M729 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Scn4bQ7M729 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Scn4bQ7M729 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.7■□□□□ 0.9
Scn4bQ7M729 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.7■□□□□ 0.9
Scn4bQ7M729 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn4bQ7M729 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Scn4bQ7M729 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn4bQ7M729 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn4bQ7M729 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn4bQ7M729 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scn4bQ7M729 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.69■□□□□ 0.9
Scn4bQ7M729 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Scn4bQ7M729 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.68■□□□□ 0.9
Scn4bQ7M729 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn4bQ7M729 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Scn4bQ7M729 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn4bQ7M729 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn4bQ7M729 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Scn4bQ7M729 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn4bQ7M729 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn4bQ7M729 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.67■□□□□ 0.9
Scn4bQ7M729 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn4bQ7M729 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn4bQ7M729 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.67■□□□□ 0.9
Scn4bQ7M729 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn4bQ7M729 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn4bQ7M729 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn4bQ7M729 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scn4bQ7M729 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.65■□□□□ 0.9
Scn4bQ7M729 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.65■□□□□ 0.9
Scn4bQ7M729 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn4bQ7M729 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn4bQ7M729 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn4bQ7M729 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn4bQ7M729 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn4bQ7M729 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn4bQ7M729 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn4bQ7M729 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.64■□□□□ 0.89
Scn4bQ7M729 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn4bQ7M729 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn4bQ7M729 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn4bQ7M729 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Scn4bQ7M729 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn4bQ7M729 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn4bQ7M729 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn4bQ7M729 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms