Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sox17Q61473 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Sox17Q61473 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.97■□□□□ 0.79
Sox17Q61473 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox17Q61473 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox17Q61473 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox17Q61473 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox17Q61473 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox17Q61473 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sox17Q61473 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.96■□□□□ 0.79
Sox17Q61473 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox17Q61473 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox17Q61473 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox17Q61473 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox17Q61473 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sox17Q61473 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox17Q61473 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox17Q61473 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox17Q61473 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox17Q61473 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox17Q61473 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox17Q61473 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.94■□□□□ 0.78
Sox17Q61473 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.94■□□□□ 0.78
Sox17Q61473 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox17Q61473 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sox17Q61473 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sox17Q61473 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox17Q61473 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Sox17Q61473 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox17Q61473 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.92■□□□□ 0.78
Sox17Q61473 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Sox17Q61473 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox17Q61473 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Sox17Q61473 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox17Q61473 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox17Q61473 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox17Q61473 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox17Q61473 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox17Q61473 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox17Q61473 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox17Q61473 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Sox17Q61473 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox17Q61473 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox17Q61473 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox17Q61473 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sox17Q61473 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
Sox17Q61473 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox17Q61473 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox17Q61473 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox17Q61473 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sox17Q61473 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox17Q61473 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.89■□□□□ 0.77
Sox17Q61473 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox17Q61473 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox17Q61473 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Sox17Q61473 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sox17Q61473 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.88■□□□□ 0.77
Sox17Q61473 Iqck-206ENSMUST00000208658 2891 ntBASIC19.88■□□□□ 0.77
Sox17Q61473 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sox17Q61473 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.88■□□□□ 0.77
Sox17Q61473 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sox17Q61473 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox17Q61473 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox17Q61473 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sox17Q61473 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sox17Q61473 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox17Q61473 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox17Q61473 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox17Q61473 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sox17Q61473 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox17Q61473 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox17Q61473 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox17Q61473 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox17Q61473 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sox17Q61473 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox17Q61473 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox17Q61473 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox17Q61473 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox17Q61473 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox17Q61473 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox17Q61473 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox17Q61473 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.84■□□□□ 0.77
Sox17Q61473 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox17Q61473 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sox17Q61473 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sox17Q61473 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox17Q61473 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox17Q61473 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox17Q61473 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.83■□□□□ 0.77
Sox17Q61473 Gm8503-201ENSMUST00000118131 455 ntBASIC19.83■□□□□ 0.77
Sox17Q61473 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox17Q61473 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sox17Q61473 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms