Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six4Q61321 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.66■■□□□ 1.06
Six4Q61321 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six4Q61321 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Six4Q61321 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six4Q61321 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six4Q61321 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six4Q61321 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.65■■□□□ 1.06
Six4Q61321 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six4Q61321 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.65■■□□□ 1.06
Six4Q61321 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.63■■□□□ 1.05
Six4Q61321 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.63■■□□□ 1.05
Six4Q61321 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six4Q61321 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.63■■□□□ 1.05
Six4Q61321 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six4Q61321 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six4Q61321 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six4Q61321 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Six4Q61321 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six4Q61321 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Six4Q61321 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.62■■□□□ 1.05
Six4Q61321 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Six4Q61321 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Six4Q61321 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Six4Q61321 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six4Q61321 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.61■■□□□ 1.05
Six4Q61321 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six4Q61321 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six4Q61321 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.61■■□□□ 1.05
Six4Q61321 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Six4Q61321 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Six4Q61321 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six4Q61321 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six4Q61321 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Six4Q61321 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six4Q61321 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six4Q61321 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six4Q61321 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Six4Q61321 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Six4Q61321 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six4Q61321 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Six4Q61321 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Six4Q61321 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Six4Q61321 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Six4Q61321 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Six4Q61321 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Six4Q61321 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Six4Q61321 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Six4Q61321 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.57■■□□□ 1.04
Six4Q61321 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Six4Q61321 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Six4Q61321 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Six4Q61321 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.57■■□□□ 1.04
Six4Q61321 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Six4Q61321 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Six4Q61321 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Six4Q61321 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Six4Q61321 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Six4Q61321 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.56■■□□□ 1.04
Six4Q61321 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.56■■□□□ 1.04
Six4Q61321 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Six4Q61321 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Six4Q61321 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Six4Q61321 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six4Q61321 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Six4Q61321 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Six4Q61321 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six4Q61321 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.55■■□□□ 1.04
Six4Q61321 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Six4Q61321 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.55■■□□□ 1.04
Six4Q61321 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Six4Q61321 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.55■■□□□ 1.04
Six4Q61321 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six4Q61321 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Six4Q61321 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.55■■□□□ 1.04
Six4Q61321 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.55■■□□□ 1.04
Six4Q61321 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.54■■□□□ 1.04
Six4Q61321 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Six4Q61321 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Six4Q61321 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Six4Q61321 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Six4Q61321 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Six4Q61321 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Six4Q61321 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six4Q61321 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.53■■□□□ 1.04
Six4Q61321 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Six4Q61321 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Six4Q61321 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six4Q61321 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six4Q61321 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six4Q61321 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Six4Q61321 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms