Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd3Q61060 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.43■□□□□ 0.7
Foxd3Q61060 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd3Q61060 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Foxd3Q61060 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd3Q61060 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.43■□□□□ 0.7
Foxd3Q61060 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd3Q61060 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.43■□□□□ 0.7
Foxd3Q61060 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd3Q61060 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.42■□□□□ 0.7
Foxd3Q61060 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Foxd3Q61060 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd3Q61060 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.42■□□□□ 0.7
Foxd3Q61060 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd3Q61060 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Foxd3Q61060 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd3Q61060 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd3Q61060 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Foxd3Q61060 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd3Q61060 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd3Q61060 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd3Q61060 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.41■□□□□ 0.7
Foxd3Q61060 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.41■□□□□ 0.7
Foxd3Q61060 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd3Q61060 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd3Q61060 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd3Q61060 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd3Q61060 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd3Q61060 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd3Q61060 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Foxd3Q61060 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxd3Q61060 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
Foxd3Q61060 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.4■□□□□ 0.7
Foxd3Q61060 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.4■□□□□ 0.7
Foxd3Q61060 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd3Q61060 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd3Q61060 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxd3Q61060 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxd3Q61060 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxd3Q61060 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd3Q61060 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd3Q61060 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd3Q61060 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Foxd3Q61060 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd3Q61060 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.39■□□□□ 0.69
Foxd3Q61060 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.38■□□□□ 0.69
Foxd3Q61060 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Foxd3Q61060 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxd3Q61060 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.37■□□□□ 0.69
Foxd3Q61060 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Foxd3Q61060 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd3Q61060 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd3Q61060 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd3Q61060 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxd3Q61060 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Foxd3Q61060 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxd3Q61060 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd3Q61060 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd3Q61060 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Foxd3Q61060 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Foxd3Q61060 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd3Q61060 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxd3Q61060 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Foxd3Q61060 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd3Q61060 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd3Q61060 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd3Q61060 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.34■□□□□ 0.69
Foxd3Q61060 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd3Q61060 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd3Q61060 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Foxd3Q61060 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.34■□□□□ 0.69
Foxd3Q61060 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd3Q61060 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Foxd3Q61060 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxd3Q61060 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.33■□□□□ 0.68
Foxd3Q61060 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Foxd3Q61060 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Foxd3Q61060 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.33■□□□□ 0.68
Foxd3Q61060 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd3Q61060 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd3Q61060 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd3Q61060 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd3Q61060 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd3Q61060 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms