Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nhlrc4Q3UP44 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nhlrc4Q3UP44 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
Nhlrc4Q3UP44 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
Nhlrc4Q3UP44 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nhlrc4Q3UP44 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nhlrc4Q3UP44 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nhlrc4Q3UP44 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nhlrc4Q3UP44 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nhlrc4Q3UP44 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhlrc4Q3UP44 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nhlrc4Q3UP44 Gm43566-201ENSMUST00000196851 808 ntBASIC19.74■□□□□ 0.75
Nhlrc4Q3UP44 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nhlrc4Q3UP44 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhlrc4Q3UP44 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhlrc4Q3UP44 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nhlrc4Q3UP44 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nhlrc4Q3UP44 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.73■□□□□ 0.75
Nhlrc4Q3UP44 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhlrc4Q3UP44 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nhlrc4Q3UP44 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nhlrc4Q3UP44 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhlrc4Q3UP44 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhlrc4Q3UP44 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nhlrc4Q3UP44 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhlrc4Q3UP44 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhlrc4Q3UP44 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlrc4Q3UP44 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nhlrc4Q3UP44 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlrc4Q3UP44 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nhlrc4Q3UP44 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nhlrc4Q3UP44 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nhlrc4Q3UP44 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.64■□□□□ 0.73
Nhlrc4Q3UP44 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhlrc4Q3UP44 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.64■□□□□ 0.73
Nhlrc4Q3UP44 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.64■□□□□ 0.73
Nhlrc4Q3UP44 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.64■□□□□ 0.73
Nhlrc4Q3UP44 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Nhlrc4Q3UP44 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nhlrc4Q3UP44 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Nhlrc4Q3UP44 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms