Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tff1Q08423 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
Tff1Q08423 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tff1Q08423 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tff1Q08423 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tff1Q08423 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tff1Q08423 Gm5812-201ENSMUST00000061073 957 ntBASIC17.56■□□□□ 0.4
Tff1Q08423 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.56■□□□□ 0.4
Tff1Q08423 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tff1Q08423 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tff1Q08423 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tff1Q08423 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tff1Q08423 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tff1Q08423 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tff1Q08423 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tff1Q08423 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tff1Q08423 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tff1Q08423 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.54■□□□□ 0.4
Tff1Q08423 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.54■□□□□ 0.4
Tff1Q08423 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tff1Q08423 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tff1Q08423 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tff1Q08423 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.53■□□□□ 0.4
Tff1Q08423 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tff1Q08423 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tff1Q08423 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tff1Q08423 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tff1Q08423 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tff1Q08423 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tff1Q08423 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.52■□□□□ 0.4
Tff1Q08423 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tff1Q08423 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.52■□□□□ 0.39
Tff1Q08423 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tff1Q08423 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tff1Q08423 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tff1Q08423 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tff1Q08423 Gm10420-201ENSMUST00000121713 882 ntBASIC17.51■□□□□ 0.39
Tff1Q08423 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tff1Q08423 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tff1Q08423 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.51■□□□□ 0.39
Tff1Q08423 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tff1Q08423 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tff1Q08423 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tff1Q08423 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tff1Q08423 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tff1Q08423 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.5■□□□□ 0.39
Tff1Q08423 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tff1Q08423 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.49■□□□□ 0.39
Tff1Q08423 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.49■□□□□ 0.39
Tff1Q08423 Gm5921-201ENSMUST00000075898 882 ntBASIC17.49■□□□□ 0.39
Tff1Q08423 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.49■□□□□ 0.39
Tff1Q08423 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tff1Q08423 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tff1Q08423 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tff1Q08423 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.48■□□□□ 0.39
Tff1Q08423 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tff1Q08423 Gm44428-201ENSMUST00000204474 874 ntBASIC17.48■□□□□ 0.39
Tff1Q08423 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tff1Q08423 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Tff1Q08423 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.48■□□□□ 0.39
Tff1Q08423 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tff1Q08423 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Tff1Q08423 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tff1Q08423 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tff1Q08423 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tff1Q08423 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tff1Q08423 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.47■□□□□ 0.39
Tff1Q08423 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tff1Q08423 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tff1Q08423 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tff1Q08423 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms