Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smn1P97801 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smn1P97801 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smn1P97801 Gm7432-201ENSMUST00000210343 879 ntBASIC18.22■□□□□ 0.51
Smn1P97801 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.22■□□□□ 0.51
Smn1P97801 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.22■□□□□ 0.51
Smn1P97801 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smn1P97801 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smn1P97801 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smn1P97801 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smn1P97801 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.21■□□□□ 0.51
Smn1P97801 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smn1P97801 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smn1P97801 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smn1P97801 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Gm11599-201ENSMUST00000118720 878 ntBASIC18.2■□□□□ 0.5
Smn1P97801 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.2■□□□□ 0.5
Smn1P97801 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.2■□□□□ 0.5
Smn1P97801 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smn1P97801 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smn1P97801 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smn1P97801 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smn1P97801 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smn1P97801 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smn1P97801 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smn1P97801 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smn1P97801 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smn1P97801 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smn1P97801 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smn1P97801 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smn1P97801 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smn1P97801 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smn1P97801 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smn1P97801 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.16■□□□□ 0.5
Smn1P97801 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smn1P97801 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smn1P97801 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smn1P97801 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
Smn1P97801 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smn1P97801 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smn1P97801 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smn1P97801 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smn1P97801 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smn1P97801 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smn1P97801 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smn1P97801 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Smn1P97801 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Smn1P97801 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smn1P97801 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smn1P97801 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.14■□□□□ 0.49
Smn1P97801 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.14■□□□□ 0.49
Smn1P97801 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smn1P97801 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smn1P97801 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smn1P97801 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smn1P97801 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smn1P97801 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smn1P97801 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Smn1P97801 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smn1P97801 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smn1P97801 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smn1P97801 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smn1P97801 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smn1P97801 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smn1P97801 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smn1P97801 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smn1P97801 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smn1P97801 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smn1P97801 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smn1P97801 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smn1P97801 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.11■□□□□ 0.49
Smn1P97801 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smn1P97801 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smn1P97801 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.11■□□□□ 0.49
Smn1P97801 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smn1P97801 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smn1P97801 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smn1P97801 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.1■□□□□ 0.49
Smn1P97801 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smn1P97801 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smn1P97801 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.1■□□□□ 0.49
Smn1P97801 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smn1P97801 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smn1P97801 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms