Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HmgclP38060 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HmgclP38060 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.1■□□□□ 0.97
HmgclP38060 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HmgclP38060 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.1■□□□□ 0.97
HmgclP38060 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HmgclP38060 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HmgclP38060 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HmgclP38060 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HmgclP38060 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HmgclP38060 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HmgclP38060 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HmgclP38060 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.09■□□□□ 0.97
HmgclP38060 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HmgclP38060 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HmgclP38060 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HmgclP38060 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HmgclP38060 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HmgclP38060 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HmgclP38060 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HmgclP38060 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HmgclP38060 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
HmgclP38060 Gm5921-201ENSMUST00000075898 882 ntBASIC21.08■□□□□ 0.97
HmgclP38060 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HmgclP38060 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
HmgclP38060 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.07■□□□□ 0.96
HmgclP38060 Gm45444-201ENSMUST00000211394 898 ntBASIC21.07■□□□□ 0.96
HmgclP38060 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HmgclP38060 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HmgclP38060 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.06■□□□□ 0.96
HmgclP38060 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HmgclP38060 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HmgclP38060 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HmgclP38060 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HmgclP38060 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HmgclP38060 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HmgclP38060 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HmgclP38060 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HmgclP38060 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HmgclP38060 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HmgclP38060 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HmgclP38060 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
HmgclP38060 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HmgclP38060 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.04■□□□□ 0.96
HmgclP38060 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
HmgclP38060 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HmgclP38060 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HmgclP38060 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HmgclP38060 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HmgclP38060 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HmgclP38060 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.03■□□□□ 0.96
HmgclP38060 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HmgclP38060 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HmgclP38060 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HmgclP38060 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HmgclP38060 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HmgclP38060 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HmgclP38060 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
HmgclP38060 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HmgclP38060 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HmgclP38060 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HmgclP38060 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HmgclP38060 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HmgclP38060 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.01■□□□□ 0.95
HmgclP38060 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HmgclP38060 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HmgclP38060 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HmgclP38060 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21■□□□□ 0.95
HmgclP38060 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HmgclP38060 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HmgclP38060 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21■□□□□ 0.95
HmgclP38060 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21■□□□□ 0.95
HmgclP38060 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
HmgclP38060 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.99■□□□□ 0.95
HmgclP38060 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HmgclP38060 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
HmgclP38060 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HmgclP38060 Gm13238-201ENSMUST00000117655 780 ntBASIC20.99■□□□□ 0.95
HmgclP38060 Gm43566-201ENSMUST00000196851 808 ntBASIC20.99■□□□□ 0.95
HmgclP38060 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.99■□□□□ 0.95
HmgclP38060 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HmgclP38060 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HmgclP38060 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HmgclP38060 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HmgclP38060 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HmgclP38060 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HmgclP38060 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HmgclP38060 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HmgclP38060 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HmgclP38060 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HmgclP38060 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.97■□□□□ 0.95
HmgclP38060 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HmgclP38060 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HmgclP38060 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HmgclP38060 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HmgclP38060 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HmgclP38060 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HmgclP38060 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
HmgclP38060 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HmgclP38060 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms