Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40P27512 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40P27512 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40P27512 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40P27512 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40P27512 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.35■□□□□ 0.69
Cd40P27512 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.35■□□□□ 0.69
Cd40P27512 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.35■□□□□ 0.69
Cd40P27512 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40P27512 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40P27512 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd40P27512 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40P27512 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd40P27512 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
Cd40P27512 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd40P27512 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd40P27512 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd40P27512 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.34■□□□□ 0.69
Cd40P27512 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd40P27512 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.33■□□□□ 0.69
Cd40P27512 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cd40P27512 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd40P27512 Gm13238-201ENSMUST00000117655 780 ntBASIC19.33■□□□□ 0.68
Cd40P27512 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.33■□□□□ 0.68
Cd40P27512 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.33■□□□□ 0.68
Cd40P27512 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cd40P27512 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cd40P27512 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.32■□□□□ 0.68
Cd40P27512 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd40P27512 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cd40P27512 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd40P27512 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd40P27512 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd40P27512 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.31■□□□□ 0.68
Cd40P27512 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd40P27512 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd40P27512 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Cd40P27512 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd40P27512 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd40P27512 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd40P27512 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd40P27512 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cd40P27512 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd40P27512 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.3■□□□□ 0.68
Cd40P27512 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd40P27512 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.3■□□□□ 0.68
Cd40P27512 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd40P27512 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd40P27512 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.29■□□□□ 0.68
Cd40P27512 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cd40P27512 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.29■□□□□ 0.68
Cd40P27512 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cd40P27512 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd40P27512 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd40P27512 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cd40P27512 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Cd40P27512 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cd40P27512 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd40P27512 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd40P27512 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd40P27512 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd40P27512 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd40P27512 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cd40P27512 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.27■□□□□ 0.68
Cd40P27512 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.27■□□□□ 0.68
Cd40P27512 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.27■□□□□ 0.68
Cd40P27512 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.27■□□□□ 0.68
Cd40P27512 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd40P27512 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.27■□□□□ 0.68
Cd40P27512 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
Cd40P27512 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd40P27512 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd40P27512 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd40P27512 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd40P27512 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd40P27512 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cd40P27512 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd40P27512 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd40P27512 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd40P27512 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd40P27512 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd40P27512 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd40P27512 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
Cd40P27512 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cd40P27512 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cd40P27512 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cd40P27512 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms