Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.42■□□□□ 0.86
Polr2jO08740 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2jO08740 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.42■□□□□ 0.86
Polr2jO08740 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2jO08740 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2jO08740 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Polr2jO08740 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2jO08740 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Polr2jO08740 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Polr2jO08740 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Polr2jO08740 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.41■□□□□ 0.86
Polr2jO08740 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Polr2jO08740 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Polr2jO08740 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.41■□□□□ 0.86
Polr2jO08740 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Polr2jO08740 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.41■□□□□ 0.86
Polr2jO08740 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2jO08740 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Polr2jO08740 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Polr2jO08740 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr2jO08740 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr2jO08740 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Polr2jO08740 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr2jO08740 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2jO08740 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2jO08740 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2jO08740 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2jO08740 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.38■□□□□ 0.85
Polr2jO08740 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2jO08740 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2jO08740 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2jO08740 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2jO08740 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2jO08740 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.37■□□□□ 0.85
Polr2jO08740 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2jO08740 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2jO08740 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2jO08740 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Polr2jO08740 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2jO08740 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2jO08740 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.36■□□□□ 0.85
Polr2jO08740 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2jO08740 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2jO08740 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2jO08740 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2jO08740 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Polr2jO08740 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2jO08740 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2jO08740 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Polr2jO08740 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Polr2jO08740 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Scarna2-201ENSMUST00000157560 414 ntBASIC20.34■□□□□ 0.85
Polr2jO08740 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2jO08740 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2jO08740 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
Polr2jO08740 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2jO08740 Gm16437-201ENSMUST00000025669 507 ntBASIC20.33■□□□□ 0.85
Polr2jO08740 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2jO08740 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2jO08740 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2jO08740 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2jO08740 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2jO08740 Gm9806-201ENSMUST00000051080 552 ntBASIC20.32■□□□□ 0.84
Polr2jO08740 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2jO08740 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2jO08740 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2jO08740 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2jO08740 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2jO08740 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2jO08740 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2jO08740 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2jO08740 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2jO08740 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.3■□□□□ 0.84
Polr2jO08740 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
Polr2jO08740 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2jO08740 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2jO08740 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms