Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.59□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.58□□□□□ -0.07
Trav13d-4A0A0G2JFX3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13d-4A0A0G2JFX3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.56□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.56□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Gm6311-201ENSMUST00000073790 878 ntBASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav13d-4A0A0G2JFX3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-4A0A0G2JFX3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms