Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28778A0A087WSK7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28778A0A087WSK7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28778A0A087WSK7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm28778A0A087WSK7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28778A0A087WSK7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.35■□□□□ 0.37
Gm28778A0A087WSK7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28778A0A087WSK7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm28778A0A087WSK7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28778A0A087WSK7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28778A0A087WSK7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gm28778A0A087WSK7 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.34■□□□□ 0.37
Gm28778A0A087WSK7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28778A0A087WSK7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.34■□□□□ 0.37
Gm28778A0A087WSK7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28778A0A087WSK7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm28778A0A087WSK7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Gm28778A0A087WSK7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28778A0A087WSK7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.33■□□□□ 0.37
Gm28778A0A087WSK7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28778A0A087WSK7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28778A0A087WSK7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28778A0A087WSK7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28778A0A087WSK7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
Gm28778A0A087WSK7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm28778A0A087WSK7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gm28778A0A087WSK7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28778A0A087WSK7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gm28778A0A087WSK7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28778A0A087WSK7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm28778A0A087WSK7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28778A0A087WSK7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28778A0A087WSK7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28778A0A087WSK7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Gm28778A0A087WSK7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28778A0A087WSK7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.27■□□□□ 0.36
Gm28778A0A087WSK7 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.27■□□□□ 0.36
Gm28778A0A087WSK7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28778A0A087WSK7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28778A0A087WSK7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gm28778A0A087WSK7 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.27■□□□□ 0.36
Gm28778A0A087WSK7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gm28778A0A087WSK7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm28778A0A087WSK7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28778A0A087WSK7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28778A0A087WSK7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28778A0A087WSK7 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.25■□□□□ 0.35
Gm28778A0A087WSK7 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms