Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.41■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trav15-2-dv6-2A0A075B650 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.38■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.37■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Gm7432-201ENSMUST00000210343 879 ntBASIC17.37■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Gm11599-201ENSMUST00000118720 878 ntBASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Notumos-201ENSMUST00000151998 2659 ntBASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-2-dv6-2A0A075B650 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.31■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms