Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 TMEM14DP-201ENST00000422205 345 ntBASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 AL442647.2-201ENST00000429864 857 ntBASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 TARDBPP1-201ENST00000442013 1203 ntBASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 AP005482.1-201ENST00000563722 1273 ntBASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 BTNL10-201ENST00000595971 695 ntBASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 AC008735.3-201ENST00000596646 500 ntBASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HOXC10Q9NYD6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 REXO1L8P-201ENST00000604378 1897 ntBASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 AC234783.1-201ENST00000441761 496 ntBASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 AC010319.3-201ENST00000597028 470 ntBASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 AC133539.2-201ENST00000604757 467 ntBASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 AL158212.4-201ENST00000624062 1286 ntBASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC10Q9NYD6 KRT8P22-201ENST00000562317 1415 ntBASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 BOLA2P3-201ENST00000404566 256 ntBASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 TOMM22P5-201ENST00000416399 439 ntBASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC10Q9NYD6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms