Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
YME1L1Q96TA2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 AC099398.1-201ENST00000567919 2776 ntBASIC17.31■□□□□ 0.36
YME1L1Q96TA2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 LINC01115-203ENST00000606068 577 ntBASIC17.31■□□□□ 0.36
YME1L1Q96TA2 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.31■□□□□ 0.36
YME1L1Q96TA2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 Z97205.2-201ENST00000564697 1639 ntBASIC17.31■□□□□ 0.36
YME1L1Q96TA2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 AC006538.1-201ENST00000567905 1585 ntBASIC17.31■□□□□ 0.36
YME1L1Q96TA2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YME1L1Q96TA2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 AC106820.2-201ENST00000563775 3264 ntBASIC17.3■□□□□ 0.36
YME1L1Q96TA2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 AL442647.2-201ENST00000429864 857 ntBASIC17.3■□□□□ 0.36
YME1L1Q96TA2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.3■□□□□ 0.36
YME1L1Q96TA2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 TDH-203ENST00000531764 1110 ntBASIC17.3■□□□□ 0.36
YME1L1Q96TA2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 AL022328.1-201ENST00000610050 478 ntBASIC17.3■□□□□ 0.36
YME1L1Q96TA2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 RPSAP52-203ENST00000622976 1023 ntBASIC17.3■□□□□ 0.36
YME1L1Q96TA2 PP12613-201ENST00000424958 2230 ntBASIC17.3■□□□□ 0.36
YME1L1Q96TA2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.3■□□□□ 0.36
YME1L1Q96TA2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 AC012313.1-201ENST00000593393 3059 ntBASIC17.29■□□□□ 0.36
YME1L1Q96TA2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.29■□□□□ 0.36
YME1L1Q96TA2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms