Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.6■□□□□ 0.25
SIX5Q8N196 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.6■□□□□ 0.25
SIX5Q8N196 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.6■□□□□ 0.25
SIX5Q8N196 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.6■□□□□ 0.25
SIX5Q8N196 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SIX5Q8N196 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SIX5Q8N196 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.6■□□□□ 0.25
SIX5Q8N196 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SIX5Q8N196 AC006277.1-201ENST00000624348 1610 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SIX5Q8N196 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.59■□□□□ 0.25
SIX5Q8N196 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SIX5Q8N196 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
SIX5Q8N196 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX5Q8N196 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX5Q8N196 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.59■□□□□ 0.25
SIX5Q8N196 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.59■□□□□ 0.25
SIX5Q8N196 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX5Q8N196 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX5Q8N196 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX5Q8N196 AL589935.2-201ENST00000616471 1231 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 TUBB8P12-201ENST00000308911 1335 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 TUBB7P-202ENST00000428444 1305 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 TUBB8P7-204ENST00000567960 1332 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 AL589702.1-201ENST00000641229 1509 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SIX5Q8N196 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 AC116353.5-201ENST00000638148 1699 ntBASIC16.59■□□□□ 0.25
SIX5Q8N196 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIX5Q8N196 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SIX5Q8N196 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SIX5Q8N196 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.58■□□□□ 0.25
SIX5Q8N196 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIX5Q8N196 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIX5Q8N196 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.58■□□□□ 0.25
SIX5Q8N196 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIX5Q8N196 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.58■□□□□ 0.25
SIX5Q8N196 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIX5Q8N196 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SIX5Q8N196 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.58■□□□□ 0.24
SIX5Q8N196 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 AC093724.1-201ENST00000448659 1027 ntBASIC16.58■□□□□ 0.24
SIX5Q8N196 AC099548.2-209ENST00000480264 625 ntBASIC16.58■□□□□ 0.24
SIX5Q8N196 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.58■□□□□ 0.24
SIX5Q8N196 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.58■□□□□ 0.24
SIX5Q8N196 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.58■□□□□ 0.24
SIX5Q8N196 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.58■□□□□ 0.24
SIX5Q8N196 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 SLC25A47P1-201ENST00000531577 414 ntBASIC16.58■□□□□ 0.24
SIX5Q8N196 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.58■□□□□ 0.24
SIX5Q8N196 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.58■□□□□ 0.24
SIX5Q8N196 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.58■□□□□ 0.24
SIX5Q8N196 RARRES2P5-201ENST00000564013 466 ntBASIC16.58■□□□□ 0.24
SIX5Q8N196 AC103810.3-201ENST00000583567 96 ntBASIC16.58■□□□□ 0.24
SIX5Q8N196 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.58■□□□□ 0.24
SIX5Q8N196 AC074044.1-201ENST00000609673 707 ntBASIC16.58■□□□□ 0.24
SIX5Q8N196 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.58■□□□□ 0.24
SIX5Q8N196 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX5Q8N196 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.58■□□□□ 0.24
SIX5Q8N196 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SIX5Q8N196 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
SIX5Q8N196 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.58■□□□□ 0.24
SIX5Q8N196 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SIX5Q8N196 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SIX5Q8N196 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms