Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AL160237.2-201ENST00000556165 472 ntBASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 MTDHP3-201ENST00000594186 672 ntBASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 MTDHP4-201ENST00000600287 670 ntBASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AC069148.1-201ENST00000608741 768 ntBASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 ELK2BP-201ENST00000415014 1224 ntBASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 GGTLC5P-201ENST00000617623 998 ntBASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 AL109954.1-202ENST00000564051 2148 ntBASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D4Q9Y2X8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D4Q9Y2X8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms