Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 AC009407.1-201ENST00000568958 598 ntBASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 AC138761.1-201ENST00000584393 385 ntBASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 AC087499.5-201ENST00000452760 1342 ntBASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 REXO1L8P-201ENST00000604378 1897 ntBASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.71■□□□□ 0.75
HMG20BQ9P0W2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
HMG20BQ9P0W2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
HMG20BQ9P0W2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 AL365330.1-201ENST00000607459 531 ntBASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 AC022144.1-201ENST00000602255 1580 ntBASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HMG20BQ9P0W2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 SPDYE17-201ENST00000412399 783 ntBASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 AC006449.6-201ENST00000612330 2296 ntBASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms