Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CDCA3Q99618 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.69■□□□□ 0.26
CDCA3Q99618 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 AC026954.1-201ENST00000429771 1293 ntBASIC16.69■□□□□ 0.26
CDCA3Q99618 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.69■□□□□ 0.26
CDCA3Q99618 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 RPL13AP20-201ENST00000459725 609 ntBASIC16.69■□□□□ 0.26
CDCA3Q99618 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDCA3Q99618 AC009542.2-202ENST00000619004 1067 ntBASIC16.69■□□□□ 0.26
CDCA3Q99618 AC005252.2-201ENST00000624630 1141 ntBASIC16.69■□□□□ 0.26
CDCA3Q99618 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.69■□□□□ 0.26
CDCA3Q99618 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA3Q99618 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDCA3Q99618 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDCA3Q99618 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 AC026471.1-201ENST00000564629 3026 ntBASIC16.69■□□□□ 0.26
CDCA3Q99618 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDCA3Q99618 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA3Q99618 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDCA3Q99618 BNIP3P1-202ENST00000550043 1585 ntBASIC16.68■□□□□ 0.26
CDCA3Q99618 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDCA3Q99618 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA3Q99618 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AC092506.1-202ENST00000401022 528 ntBASIC16.68■□□□□ 0.26
CDCA3Q99618 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CDCA3Q99618 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA3Q99618 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AC106760.1-201ENST00000508690 800 ntBASIC16.68■□□□□ 0.26
CDCA3Q99618 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.68■□□□□ 0.26
CDCA3Q99618 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.68■□□□□ 0.26
CDCA3Q99618 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 AC000095.1-201ENST00000603208 874 ntBASIC16.68■□□□□ 0.26
CDCA3Q99618 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA3Q99618 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDCA3Q99618 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDCA3Q99618 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA3Q99618 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
CDCA3Q99618 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.67■□□□□ 0.26
CDCA3Q99618 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDCA3Q99618 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
CDCA3Q99618 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDCA3Q99618 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CDCA3Q99618 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDCA3Q99618 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms