Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.34■□□□□ 0.37
CDR2Q01850 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDR2Q01850 AC073389.1-201ENST00000595595 795 ntBASIC17.34■□□□□ 0.37
CDR2Q01850 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDR2Q01850 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.34■□□□□ 0.37
CDR2Q01850 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.34■□□□□ 0.37
CDR2Q01850 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.34■□□□□ 0.37
CDR2Q01850 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDR2Q01850 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDR2Q01850 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDR2Q01850 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDR2Q01850 AC105917.1-201ENST00000506637 2539 ntBASIC17.34■□□□□ 0.37
CDR2Q01850 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
CDR2Q01850 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDR2Q01850 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
CDR2Q01850 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDR2Q01850 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.33■□□□□ 0.37
CDR2Q01850 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.33■□□□□ 0.37
CDR2Q01850 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDR2Q01850 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDR2Q01850 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.33■□□□□ 0.37
CDR2Q01850 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
CDR2Q01850 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDR2Q01850 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDR2Q01850 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDR2Q01850 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDR2Q01850 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDR2Q01850 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 MIR940-201ENST00000401276 94 ntBASIC17.33■□□□□ 0.36
CDR2Q01850 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 AL355306.1-201ENST00000415580 579 ntBASIC17.33■□□□□ 0.36
CDR2Q01850 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 AC040169.1-201ENST00000565382 521 ntBASIC17.33■□□□□ 0.36
CDR2Q01850 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.33■□□□□ 0.36
CDR2Q01850 MIR4321-201ENST00000592276 80 ntBASIC17.33■□□□□ 0.36
CDR2Q01850 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.33■□□□□ 0.36
CDR2Q01850 AC092902.6-201ENST00000641783 218 ntBASIC17.33■□□□□ 0.36
CDR2Q01850 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDR2Q01850 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.33■□□□□ 0.36
CDR2Q01850 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CDR2Q01850 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CDR2Q01850 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDR2Q01850 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 FLJ16779-201ENST00000612722 7638 ntBASIC17.32■□□□□ 0.36
CDR2Q01850 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.32■□□□□ 0.36
CDR2Q01850 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 MIR574-201ENST00000385209 96 ntBASIC17.32■□□□□ 0.36
CDR2Q01850 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.32■□□□□ 0.36
CDR2Q01850 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.32■□□□□ 0.36
CDR2Q01850 AL671277.1-201ENST00000429656 993 ntBASIC17.32■□□□□ 0.36
CDR2Q01850 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 KRT18P58-201ENST00000527480 1120 ntBASIC17.32■□□□□ 0.36
CDR2Q01850 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CDR2Q01850 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.32■□□□□ 0.36
CDR2Q01850 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.32■□□□□ 0.36
CDR2Q01850 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDR2Q01850 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.32■□□□□ 0.36
CDR2Q01850 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDR2Q01850 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.32■□□□□ 0.36
CDR2Q01850 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDR2Q01850 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDR2Q01850 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDR2Q01850 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDR2Q01850 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms