Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Gabra1P62812 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.11□□□□□ -0.63
Gabra1P62812 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gabra1P62812 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Mir874-201ENSMUST00000104769 76 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.11□□□□□ -0.63
Gabra1P62812 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.11□□□□□ -0.63
Gabra1P62812 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Gm44492-201ENSMUST00000197012 141 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.11□□□□□ -0.63
Gabra1P62812 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.11□□□□□ -0.63
Gabra1P62812 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.11□□□□□ -0.63
Gabra1P62812 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Gabra1P62812 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.11□□□□□ -0.63
Gabra1P62812 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.11□□□□□ -0.63
Gabra1P62812 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.11□□□□□ -0.63
Gabra1P62812 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Gabra1P62812 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gabra1P62812 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.1□□□□□ -0.63
Gabra1P62812 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gabra1P62812 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.1□□□□□ -0.63
Gabra1P62812 Gm14140-201ENSMUST00000119999 995 ntBASIC11.1□□□□□ -0.63
Gabra1P62812 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Gm38225-201ENSMUST00000194001 393 ntBASIC11.1□□□□□ -0.63
Gabra1P62812 Gm45453-201ENSMUST00000211758 853 ntBASIC11.1□□□□□ -0.63
Gabra1P62812 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Gabra1P62812 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.1□□□□□ -0.63
Gabra1P62812 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gabra1P62812 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms