Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Gm20445-201ENSMUST00000061905 565 ntBASIC13.02□□□□□ -0.33
Apoa4P06728 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Apoa4P06728 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Apoa4P06728 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Apoa4P06728 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Apoa4P06728 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Apoa4P06728 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.01□□□□□ -0.33
Apoa4P06728 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.01□□□□□ -0.33
Apoa4P06728 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Gm21854-201ENSMUST00000179901 471 ntBASIC13.01□□□□□ -0.33
Apoa4P06728 Gm24694-201ENSMUST00000180054 110 ntBASIC13.01□□□□□ -0.33
Apoa4P06728 Gm9522-201ENSMUST00000182394 926 ntBASIC13.01□□□□□ -0.33
Apoa4P06728 Gm27663-201ENSMUST00000184839 110 ntBASIC13.01□□□□□ -0.33
Apoa4P06728 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Apoa4P06728 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Apoa4P06728 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.01□□□□□ -0.33
Apoa4P06728 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Apoa4P06728 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Apoa4P06728 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Apoa4P06728 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Apoa4P06728 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Apoa4P06728 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.01□□□□□ -0.33
Apoa4P06728 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Apoa4P06728 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.01□□□□□ -0.33
Apoa4P06728 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.01□□□□□ -0.33
Apoa4P06728 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Apoa4P06728 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Apoa4P06728 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Apoa4P06728 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Apoa4P06728 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13□□□□□ -0.33
Apoa4P06728 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Apoa4P06728 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13□□□□□ -0.33
Apoa4P06728 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13□□□□□ -0.33
Apoa4P06728 Gm15487-201ENSMUST00000122373 465 ntBASIC13□□□□□ -0.33
Apoa4P06728 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13□□□□□ -0.33
Apoa4P06728 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13□□□□□ -0.33
Apoa4P06728 Gm19931-201ENSMUST00000198920 368 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms