Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 MTHFR-217ENST00000641820 1569 ntBASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAI2Q9Y5P3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAI2Q9Y5P3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAI2Q9Y5P3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 FAM86GP-201ENST00000448322 971 ntBASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 ALG1L8P-201ENST00000533887 760 ntBASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AL365330.1-201ENST00000607459 531 ntBASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.45■□□□□ 0.22
RAI2Q9Y5P3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 INGX-202ENST00000489074 768 ntBASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 AC026150.2-201ENST00000564693 1156 ntBASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 RARRES2P9-201ENST00000565168 469 ntBASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 AC024267.1-201ENST00000582320 895 ntBASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAI2Q9Y5P3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms