Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 AC005622.1-201ENST00000636801 1703 ntBASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 CYP2T1P-202ENST00000641596 2535 ntBASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 ADH5P3-201ENST00000433842 1137 ntBASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.38■□□□□ 0.05
SIMC1Q8NDZ2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 LINC01144-201ENST00000626198 1710 ntBASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AC002056.1-201ENST00000395613 760 ntBASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AC112191.1-201ENST00000523689 701 ntBASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AC010327.4-202ENST00000591484 748 ntBASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AC020765.3-201ENST00000613051 740 ntBASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SIMC1Q8NDZ2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 WASH6P-202ENST00000359512 1437 ntBASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SIMC1Q8NDZ2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms