Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.4■□□□□ 0.06
KNTC1P50748 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KNTC1P50748 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
KNTC1P50748 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KNTC1P50748 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.39■□□□□ 0.05
KNTC1P50748 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
KNTC1P50748 AC025048.3-201ENST00000590609 569 ntBASIC15.39■□□□□ 0.05
KNTC1P50748 AC005702.4-201ENST00000618393 416 ntBASIC15.39■□□□□ 0.05
KNTC1P50748 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
KNTC1P50748 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 AL031731.1-201ENST00000642131 2094 ntBASIC15.39■□□□□ 0.05
KNTC1P50748 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
KNTC1P50748 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.39■□□□□ 0.05
KNTC1P50748 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 AL390961.4-201ENST00000623958 2535 ntBASIC15.39■□□□□ 0.05
KNTC1P50748 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.39■□□□□ 0.05
KNTC1P50748 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.39■□□□□ 0.05
KNTC1P50748 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.39■□□□□ 0.05
KNTC1P50748 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.39■□□□□ 0.05
KNTC1P50748 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.39■□□□□ 0.05
KNTC1P50748 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.39■□□□□ 0.05
KNTC1P50748 CROCCP4-201ENST00000457096 498 ntBASIC15.39■□□□□ 0.05
KNTC1P50748 RN7SL560P-201ENST00000577943 264 ntBASIC15.39■□□□□ 0.05
KNTC1P50748 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KNTC1P50748 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KNTC1P50748 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
KNTC1P50748 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
KNTC1P50748 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
KNTC1P50748 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 BCRP2-202ENST00000447763 634 ntBASIC15.38■□□□□ 0.05
KNTC1P50748 BCRP6-201ENST00000510112 632 ntBASIC15.38■□□□□ 0.05
KNTC1P50748 BCRP7-201ENST00000511549 544 ntBASIC15.38■□□□□ 0.05
KNTC1P50748 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.38■□□□□ 0.05
KNTC1P50748 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.38■□□□□ 0.05
KNTC1P50748 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
KNTC1P50748 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.38■□□□□ 0.05
KNTC1P50748 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 AL512652.2-201ENST00000625156 1716 ntBASIC15.38■□□□□ 0.05
KNTC1P50748 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 AL603756.1-201ENST00000606511 2163 ntBASIC15.38■□□□□ 0.05
KNTC1P50748 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 AC012313.1-201ENST00000593393 3059 ntBASIC15.38■□□□□ 0.05
KNTC1P50748 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
KNTC1P50748 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.38■□□□□ 0.05
KNTC1P50748 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KNTC1P50748 AL136982.4-201ENST00000437689 1740 ntBASIC15.37■□□□□ 0.05
KNTC1P50748 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KNTC1P50748 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KNTC1P50748 KRT43P-201ENST00000434019 910 ntBASIC15.37■□□□□ 0.05
KNTC1P50748 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.37■□□□□ 0.05
KNTC1P50748 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.37■□□□□ 0.05
KNTC1P50748 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.37■□□□□ 0.05
KNTC1P50748 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.37■□□□□ 0.05
KNTC1P50748 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.37■□□□□ 0.05
KNTC1P50748 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KNTC1P50748 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KNTC1P50748 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms