Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SPTA1P02549 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPTA1P02549 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.68□□□□□ -0.06
SPTA1P02549 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPTA1P02549 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.68□□□□□ -0.06
SPTA1P02549 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SPTA1P02549 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPTA1P02549 CLK3P2-201ENST00000427566 1453 ntBASIC14.68□□□□□ -0.06
SPTA1P02549 SLC25A24P2-201ENST00000415059 510 ntBASIC14.67□□□□□ -0.06
SPTA1P02549 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 AL442647.2-201ENST00000429864 857 ntBASIC14.67□□□□□ -0.06
SPTA1P02549 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
SPTA1P02549 AL355864.2-201ENST00000447420 863 ntBASIC14.67□□□□□ -0.06
SPTA1P02549 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.67□□□□□ -0.06
SPTA1P02549 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.67□□□□□ -0.06
SPTA1P02549 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SPTA1P02549 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.67□□□□□ -0.06
SPTA1P02549 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.67□□□□□ -0.06
SPTA1P02549 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.67□□□□□ -0.06
SPTA1P02549 C2orf69P2-201ENST00000562032 1123 ntBASIC14.67□□□□□ -0.06
SPTA1P02549 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.67□□□□□ -0.06
SPTA1P02549 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 AL589702.1-201ENST00000641229 1509 ntBASIC14.67□□□□□ -0.06
SPTA1P02549 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SPTA1P02549 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.67□□□□□ -0.06
SPTA1P02549 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 AC093525.9-201ENST00000624961 1746 ntBASIC14.67□□□□□ -0.06
SPTA1P02549 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPTA1P02549 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.67□□□□□ -0.06
SPTA1P02549 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SPTA1P02549 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SPTA1P02549 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SPTA1P02549 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.66□□□□□ -0.06
SPTA1P02549 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.66□□□□□ -0.06
SPTA1P02549 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.66□□□□□ -0.06
SPTA1P02549 MIR5572-201ENST00000583188 137 ntBASIC14.66□□□□□ -0.06
SPTA1P02549 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.66□□□□□ -0.06
SPTA1P02549 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SPTA1P02549 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.66□□□□□ -0.06
SPTA1P02549 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.66□□□□□ -0.06
SPTA1P02549 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 TUBB8P12-201ENST00000308911 1335 ntBASIC14.66□□□□□ -0.06
SPTA1P02549 TUBB7P-202ENST00000428444 1305 ntBASIC14.66□□□□□ -0.06
SPTA1P02549 TUBB8P7-204ENST00000567960 1332 ntBASIC14.66□□□□□ -0.06
SPTA1P02549 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
SPTA1P02549 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SPTA1P02549 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.66□□□□□ -0.06
SPTA1P02549 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.66□□□□□ -0.06
SPTA1P02549 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SPTA1P02549 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPTA1P02549 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
SPTA1P02549 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms