Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD2O14647 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CHD2O14647 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.11■■□□□ 1.13
CHD2O14647 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC22.11■■□□□ 1.13
CHD2O14647 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD2O14647 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CHD2O14647 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD2O14647 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CHD2O14647 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD2O14647 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD2O14647 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD2O14647 PTPA-217ENST00000434095 870 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 RERG-205ENST00000537647 935 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD2O14647 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CHD2O14647 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC22.1■■□□□ 1.13
CHD2O14647 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CHD2O14647 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CHD2O14647 AMT-233ENST00000636522 1620 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 AC091046.1-201ENST00000331871 207 ntBASIC22.1■■□□□ 1.13
CHD2O14647 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD2O14647 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 AP001505.2-201ENST00000616815 443 ntBASIC22.1■■□□□ 1.13
CHD2O14647 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD2O14647 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD2O14647 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
CHD2O14647 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CHD2O14647 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC22.09■■□□□ 1.13
CHD2O14647 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CHD2O14647 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 FNTAP2-201ENST00000430308 634 ntBASIC22.09■■□□□ 1.13
CHD2O14647 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC22.09■■□□□ 1.13
CHD2O14647 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
CHD2O14647 KRT18P25-201ENST00000508931 1278 ntBASIC22.09■■□□□ 1.13
CHD2O14647 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC22.09■■□□□ 1.13
CHD2O14647 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC22.09■■□□□ 1.13
CHD2O14647 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
CHD2O14647 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CHD2O14647 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD2O14647 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC22.09■■□□□ 1.13
CHD2O14647 AP001282.1-201ENST00000531301 1499 ntBASIC22.08■■□□□ 1.13
CHD2O14647 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHD2O14647 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHD2O14647 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CHD2O14647 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
CHD2O14647 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CHD2O14647 POM121L10P-201ENST00000436994 1285 ntBASIC22.08■■□□□ 1.13
CHD2O14647 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC22.08■■□□□ 1.13
CHD2O14647 RN7SL769P-201ENST00000469386 295 ntBASIC22.08■■□□□ 1.13
CHD2O14647 ECM1P1-201ENST00000604092 1279 ntBASIC22.08■■□□□ 1.13
CHD2O14647 U62317.3-201ENST00000608319 855 ntBASIC22.08■■□□□ 1.13
CHD2O14647 AC244452.3-201ENST00000636814 210 ntBASIC22.08■■□□□ 1.13
CHD2O14647 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
CHD2O14647 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHD2O14647 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHD2O14647 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.08■■□□□ 1.13
CHD2O14647 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CHD2O14647 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.12
CHD2O14647 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC22.08■■□□□ 1.12
CHD2O14647 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC22.08■■□□□ 1.12
CHD2O14647 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
CHD2O14647 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CHD2O14647 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC22.08■■□□□ 1.12
CHD2O14647 GAPDHP40-201ENST00000505218 1006 ntBASIC22.08■■□□□ 1.12
CHD2O14647 RN7SL574P-201ENST00000581512 297 ntBASIC22.08■■□□□ 1.12
CHD2O14647 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms