Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.54■□□□□ 0.4
SSX2IPQ9Y2D8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 MTND6P24-201ENST00000440466 518 ntBASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 RNA5SP410-201ENST00000516285 106 ntBASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 SPDYE22P-201ENST00000582158 798 ntBASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 AL662799.1-202ENST00000614205 422 ntBASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 AL139011.1-202ENST00000642063 584 ntBASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 AC063926.3-201ENST00000624734 5658 ntBASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX2IPQ9Y2D8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 AC024267.1-201ENST00000582320 895 ntBASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.52■□□□□ 0.4
SSX2IPQ9Y2D8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSX2IPQ9Y2D8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 AL391005.1-201ENST00000623953 2435 ntBASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms