Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 AC108860.2-201ENST00000562760 2183 ntBASIC16.11■□□□□ 0.17
NCDNQ9UBB6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCDNQ9UBB6 KRT8P22-201ENST00000562317 1415 ntBASIC16.11■□□□□ 0.17
NCDNQ9UBB6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 KRT8P13-201ENST00000463294 1010 ntBASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 RARRES2P5-201ENST00000564013 466 ntBASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AC106872.11-201ENST00000605838 421 ntBASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCDNQ9UBB6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 RPL7P3-201ENST00000441388 714 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 BCRP2-202ENST00000447763 634 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 BCRP6-201ENST00000510112 632 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 BCRP7-201ENST00000511549 544 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 AC092337.1-201ENST00000568699 1129 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 AC091271.1-201ENST00000611877 1162 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 CU634019.7-201ENST00000624153 1185 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 FP236241.2-201ENST00000624906 1185 ntBASIC16.09■□□□□ 0.17
NCDNQ9UBB6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCDNQ9UBB6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms