Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 MTDHP3-201ENST00000594186 672 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 AL049840.3-201ENST00000602669 611 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 AL356488.2-201ENST00000602755 427 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 AL805961.1-202ENST00000641562 540 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CAPN3P20807 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 NFIC-211ENST00000641145 8399 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CAPN3P20807 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN3P20807 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 AC006504.4-201ENST00000592118 1568 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.75■□□□□ 0.11
CAPN3P20807 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN3P20807 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPN3P20807 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.74■□□□□ 0.11
CAPN3P20807 HTR5BP-201ENST00000430851 1154 ntBASIC15.74■□□□□ 0.11
CAPN3P20807 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPN3P20807 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 MTDHP4-201ENST00000600287 670 ntBASIC15.74■□□□□ 0.11
CAPN3P20807 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 AC020765.3-201ENST00000613051 740 ntBASIC15.74■□□□□ 0.11
CAPN3P20807 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN3P20807 AC104109.2-201ENST00000602919 1418 ntBASIC15.74■□□□□ 0.11
CAPN3P20807 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN3P20807 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN3P20807 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 AL592424.1-201ENST00000563624 1536 ntBASIC15.73■□□□□ 0.11
CAPN3P20807 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN3P20807 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN3P20807 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CAPN3P20807 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.73■□□□□ 0.11
CAPN3P20807 AC112482.1-201ENST00000492080 688 ntBASIC15.73■□□□□ 0.11
CAPN3P20807 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN3P20807 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 IGHV3-22-201ENST00000520721 359 ntBASIC15.73■□□□□ 0.11
CAPN3P20807 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN3P20807 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN3P20807 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN3P20807 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN3P20807 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms