Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 OARD1-212ENST00000482515 832 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC21.04■□□□□ 0.96
COL5A2P05997 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC21.04■□□□□ 0.96
COL5A2P05997 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 ACTG1P17-201ENST00000558391 1119 ntBASIC21.04■□□□□ 0.96
COL5A2P05997 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.04■□□□□ 0.96
COL5A2P05997 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.04■□□□□ 0.96
COL5A2P05997 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL5A2P05997 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL5A2P05997 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.04■□□□□ 0.96
COL5A2P05997 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL5A2P05997 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL5A2P05997 AC104306.2-201ENST00000451877 341 ntBASIC21.03■□□□□ 0.96
COL5A2P05997 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL5A2P05997 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.03■□□□□ 0.96
COL5A2P05997 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.03■□□□□ 0.96
COL5A2P05997 AC015910.1-201ENST00000579400 975 ntBASIC21.03■□□□□ 0.96
COL5A2P05997 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.03■□□□□ 0.96
COL5A2P05997 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
COL5A2P05997 AL022328.3-201ENST00000607943 679 ntBASIC21.03■□□□□ 0.96
COL5A2P05997 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC21.03■□□□□ 0.96
COL5A2P05997 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.03■□□□□ 0.96
COL5A2P05997 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 HARS-202ENST00000415192 1401 ntTSL 2 BASIC21.03■□□□□ 0.96
COL5A2P05997 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.03■□□□□ 0.96
COL5A2P05997 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL5A2P05997 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 AC005915.1-201ENST00000624912 2018 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.02■□□□□ 0.96
COL5A2P05997 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL5A2P05997 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
COL5A2P05997 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.02■□□□□ 0.96
COL5A2P05997 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
COL5A2P05997 SLC25A24P2-201ENST00000415059 510 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 FAM197Y7-201ENST00000432892 766 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.02■□□□□ 0.96
COL5A2P05997 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.02■□□□□ 0.96
COL5A2P05997 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
COL5A2P05997 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 AC078819.1-201ENST00000547454 765 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 AC012085.1-201ENST00000548270 765 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC21.02■□□□□ 0.96
COL5A2P05997 AC097359.3-201ENST00000603982 1210 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 DRD5P1-201ENST00000456605 1438 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.02■□□□□ 0.96
COL5A2P05997 AC078925.2-201ENST00000624013 1973 ntBASIC21.02■□□□□ 0.96
COL5A2P05997 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 GRN-222ENST00000639447 1314 ntTSL 2 BASIC21.02■□□□□ 0.96
COL5A2P05997 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.02■□□□□ 0.96
COL5A2P05997 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL5A2P05997 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL5A2P05997 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL5A2P05997 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL5A2P05997 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
COL5A2P05997 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL5A2P05997 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL5A2P05997 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
COL5A2P05997 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL5A2P05997 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL5A2P05997 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 AC006001.1-201ENST00000325130 474 ntBASIC21.01■□□□□ 0.95
COL5A2P05997 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC21.01■□□□□ 0.95
COL5A2P05997 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
COL5A2P05997 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.01■□□□□ 0.95
COL5A2P05997 AL591846.1-201ENST00000451736 433 ntBASIC21.01■□□□□ 0.95
COL5A2P05997 AC091804.1-201ENST00000486888 567 ntBASIC21.01■□□□□ 0.95
COL5A2P05997 AP001258.2-201ENST00000529891 490 ntBASIC21.01■□□□□ 0.95
COL5A2P05997 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC21.01■□□□□ 0.95
COL5A2P05997 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.01■□□□□ 0.95
COL5A2P05997 AC138951.2-201ENST00000623455 1161 ntBASIC21.01■□□□□ 0.95
COL5A2P05997 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.01■□□□□ 0.95
COL5A2P05997 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.01■□□□□ 0.95
COL5A2P05997 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COL5A2P05997 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms