Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 TUBB1P2-201ENST00000422712 1306 ntBASIC17.34■□□□□ 0.37
LCHNA4D1U4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 CSF2RBP1-201ENST00000447905 391 ntBASIC17.34■□□□□ 0.37
LCHNA4D1U4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 TUBB1P1-201ENST00000503144 1300 ntBASIC17.34■□□□□ 0.37
LCHNA4D1U4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 LINC01115-203ENST00000606068 577 ntBASIC17.34■□□□□ 0.37
LCHNA4D1U4 AL391069.4-201ENST00000609583 481 ntBASIC17.34■□□□□ 0.37
LCHNA4D1U4 AC020765.3-201ENST00000613051 740 ntBASIC17.34■□□□□ 0.37
LCHNA4D1U4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LCHNA4D1U4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCHNA4D1U4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LCHNA4D1U4 GPAA1P2-202ENST00000606848 1787 ntBASIC17.33■□□□□ 0.37
LCHNA4D1U4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.33■□□□□ 0.37
LCHNA4D1U4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.33■□□□□ 0.37
LCHNA4D1U4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.33■□□□□ 0.37
LCHNA4D1U4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.33■□□□□ 0.37
LCHNA4D1U4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCHNA4D1U4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LCHNA4D1U4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 AC004945.1-201ENST00000416738 983 ntBASIC17.33■□□□□ 0.36
LCHNA4D1U4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LCHNA4D1U4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LCHNA4D1U4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.33■□□□□ 0.36
LCHNA4D1U4 CU634019.7-201ENST00000624153 1185 ntBASIC17.33■□□□□ 0.36
LCHNA4D1U4 FP236241.2-201ENST00000624906 1185 ntBASIC17.33■□□□□ 0.36
LCHNA4D1U4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LCHNA4D1U4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LCHNA4D1U4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 AL031731.1-201ENST00000642131 2094 ntBASIC17.33■□□□□ 0.36
LCHNA4D1U4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.33■□□□□ 0.36
LCHNA4D1U4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCHNA4D1U4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 KRT8P22-201ENST00000562317 1415 ntBASIC17.32■□□□□ 0.36
LCHNA4D1U4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 BCRP2-202ENST00000447763 634 ntBASIC17.32■□□□□ 0.36
LCHNA4D1U4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 BCRP6-201ENST00000510112 632 ntBASIC17.32■□□□□ 0.36
LCHNA4D1U4 BCRP7-201ENST00000511549 544 ntBASIC17.32■□□□□ 0.36
LCHNA4D1U4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 TDH-203ENST00000531764 1110 ntBASIC17.32■□□□□ 0.36
LCHNA4D1U4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.32■□□□□ 0.36
LCHNA4D1U4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 AC080080.1-201ENST00000625121 2420 ntBASIC17.32■□□□□ 0.36
LCHNA4D1U4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCHNA4D1U4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
LCHNA4D1U4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms