Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Gm27331-201ENSMUST00000183705 60 ntBASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Gm29705-201ENSMUST00000212598 474 ntBASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Gm26315-201ENSMUST00000083890 321 ntBASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ripk4Q9ERK0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Gm44414-201ENSMUST00000203660 2109 ntBASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ripk4Q9ERK0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ripk4Q9ERK0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ripk4Q9ERK0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ripk4Q9ERK0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ripk4Q9ERK0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Gm5187-201ENSMUST00000117317 991 ntBASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ripk4Q9ERK0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.19■□□□□ 0.18
Ripk4Q9ERK0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms