Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm19078-201ENSMUST00000206311 727 ntBASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gm17794-201ENSMUST00000220252 955 ntBASIC12.37□□□□□ -0.43
Cdc40Q9DC48 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.37□□□□□ -0.43
Cdc40Q9DC48 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Gm12485-201ENSMUST00000119641 291 ntBASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdc40Q9DC48 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Gm15376-201ENSMUST00000122258 783 ntBASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Mir1894-201ENSMUST00000122802 81 ntBASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdc40Q9DC48 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms