Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 AC234782.1-201ENST00000451950 919 ntBASIC16.73■□□□□ 0.27
CDX2Q99626 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.73■□□□□ 0.27
CDX2Q99626 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.73■□□□□ 0.27
CDX2Q99626 MIR4321-201ENST00000592276 80 ntBASIC16.73■□□□□ 0.27
CDX2Q99626 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.73■□□□□ 0.27
CDX2Q99626 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.73■□□□□ 0.27
CDX2Q99626 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDX2Q99626 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDX2Q99626 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.73■□□□□ 0.27
CDX2Q99626 AC116353.5-201ENST00000638148 1699 ntBASIC16.72■□□□□ 0.27
CDX2Q99626 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDX2Q99626 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.72■□□□□ 0.27
CDX2Q99626 CNN2P10-201ENST00000443067 918 ntBASIC16.72■□□□□ 0.27
CDX2Q99626 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.72■□□□□ 0.27
CDX2Q99626 KRT18P25-201ENST00000508931 1278 ntBASIC16.72■□□□□ 0.27
CDX2Q99626 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.72■□□□□ 0.27
CDX2Q99626 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CDX2Q99626 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.72■□□□□ 0.27
CDX2Q99626 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDX2Q99626 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDX2Q99626 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.71■□□□□ 0.27
CDX2Q99626 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.71■□□□□ 0.27
CDX2Q99626 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.71■□□□□ 0.27
CDX2Q99626 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDX2Q99626 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.71■□□□□ 0.27
CDX2Q99626 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDX2Q99626 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDX2Q99626 AL023775.1-201ENST00000454907 1746 ntBASIC16.71■□□□□ 0.27
CDX2Q99626 AL512652.2-201ENST00000625156 1716 ntBASIC16.71■□□□□ 0.27
CDX2Q99626 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.71■□□□□ 0.27
CDX2Q99626 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDX2Q99626 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.71■□□□□ 0.27
CDX2Q99626 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.71■□□□□ 0.27
CDX2Q99626 AC012618.1-201ENST00000461223 412 ntBASIC16.71■□□□□ 0.27
CDX2Q99626 AC026410.3-201ENST00000514280 936 ntBASIC16.71■□□□□ 0.27
CDX2Q99626 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.71■□□□□ 0.27
CDX2Q99626 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.71■□□□□ 0.27
CDX2Q99626 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.71■□□□□ 0.27
CDX2Q99626 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.71■□□□□ 0.27
CDX2Q99626 AC093813.1-201ENST00000605066 256 ntBASIC16.71■□□□□ 0.27
CDX2Q99626 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.71■□□□□ 0.27
CDX2Q99626 AL139011.1-202ENST00000642063 584 ntBASIC16.71■□□□□ 0.27
CDX2Q99626 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.71■□□□□ 0.27
CDX2Q99626 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDX2Q99626 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.71■□□□□ 0.26
CDX2Q99626 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDX2Q99626 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDX2Q99626 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDX2Q99626 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDX2Q99626 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
CDX2Q99626 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDX2Q99626 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDX2Q99626 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDX2Q99626 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDX2Q99626 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms