Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.78■□□□□ 0.44
RFX1P22670 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.78■□□□□ 0.44
RFX1P22670 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX1P22670 TERF1P3-201ENST00000505638 1227 ntBASIC17.78■□□□□ 0.44
RFX1P22670 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.78■□□□□ 0.44
RFX1P22670 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RFX1P22670 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX1P22670 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.78■□□□□ 0.44
RFX1P22670 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX1P22670 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX1P22670 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RFX1P22670 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX1P22670 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX1P22670 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 GK-202ENST00000378941 458 ntTSL 3 BASIC17.77■□□□□ 0.44
RFX1P22670 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.77■□□□□ 0.44
RFX1P22670 CNN2P2-201ENST00000443536 909 ntBASIC17.77■□□□□ 0.44
RFX1P22670 CNN2P3-201ENST00000450201 906 ntBASIC17.77■□□□□ 0.44
RFX1P22670 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.77■□□□□ 0.44
RFX1P22670 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX1P22670 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
RFX1P22670 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.77■□□□□ 0.44
RFX1P22670 AC093520.2-201ENST00000561830 333 ntBASIC17.77■□□□□ 0.44
RFX1P22670 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX1P22670 AL136317.3-201ENST00000618497 906 ntBASIC17.77■□□□□ 0.44
RFX1P22670 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
RFX1P22670 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RFX1P22670 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX1P22670 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX1P22670 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.77■□□□□ 0.43
RFX1P22670 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 AL592424.1-201ENST00000563624 1536 ntBASIC17.77■□□□□ 0.43
RFX1P22670 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.77■□□□□ 0.43
RFX1P22670 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX1P22670 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RFX1P22670 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.76■□□□□ 0.43
RFX1P22670 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RFX1P22670 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RFX1P22670 U82695.1-201ENST00000635752 1889 ntBASIC17.76■□□□□ 0.43
RFX1P22670 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 PCDHA1-201ENST00000378133 2726 ntBASIC17.76■□□□□ 0.43
RFX1P22670 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.76■□□□□ 0.43
RFX1P22670 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX1P22670 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX1P22670 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX1P22670 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX1P22670 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.76■□□□□ 0.43
RFX1P22670 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RFX1P22670 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RFX1P22670 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms