Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 BTBD7P1-201ENST00000447253 1453 ntBASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 BASP1P1-201ENST00000430708 665 ntBASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 PHKG1P2-201ENST00000457537 863 ntBASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 AL450472.2-201ENST00000603663 1156 ntBASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 MIR6069-201ENST00000620069 79 ntBASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPC1L1Q9UHC9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 PCDH8P1-201ENST00000428983 2773 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AL365203.3-201ENST00000609742 2057 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AC074338.1-201ENST00000416825 156 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AC114501.2-201ENST00000439631 535 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 BCRP1-201ENST00000444246 691 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AL096865.1-201ENST00000606796 927 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AJ011932.1-201ENST00000621707 465 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 AC022144.1-201ENST00000602255 1580 ntBASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPC1L1Q9UHC9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 AC093214.1-201ENST00000511688 1107 ntBASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms