Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH8P55286 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH8P55286 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDH8P55286 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.41■□□□□ 0.38
CDH8P55286 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH8P55286 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDH8P55286 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH8P55286 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.41■□□□□ 0.38
CDH8P55286 MIR4453-201ENST00000584019 89 ntBASIC17.41■□□□□ 0.38
CDH8P55286 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH8P55286 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH8P55286 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH8P55286 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH8P55286 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH8P55286 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CDH8P55286 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH8P55286 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH8P55286 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CDH8P55286 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH8P55286 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH8P55286 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH8P55286 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH8P55286 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH8P55286 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH8P55286 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH8P55286 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CDH8P55286 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH8P55286 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH8P55286 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH8P55286 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH8P55286 AC069262.1-201ENST00000539058 672 ntBASIC17.4■□□□□ 0.38
CDH8P55286 AL512356.2-201ENST00000546955 174 ntBASIC17.4■□□□□ 0.38
CDH8P55286 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH8P55286 AC018529.1-201ENST00000613063 361 ntBASIC17.4■□□□□ 0.38
CDH8P55286 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH8P55286 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDH8P55286 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
CDH8P55286 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH8P55286 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH8P55286 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDH8P55286 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDH8P55286 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.39■□□□□ 0.38
CDH8P55286 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 AL596087.1-201ENST00000400979 1969 ntBASIC17.39■□□□□ 0.37
CDH8P55286 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH8P55286 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH8P55286 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH8P55286 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH8P55286 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 AC025678.2-201ENST00000562061 970 ntBASIC17.39■□□□□ 0.37
CDH8P55286 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH8P55286 AC003101.2-201ENST00000612557 442 ntBASIC17.39■□□□□ 0.37
CDH8P55286 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 MIR6080-201ENST00000617359 66 ntBASIC17.39■□□□□ 0.37
CDH8P55286 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH8P55286 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH8P55286 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH8P55286 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH8P55286 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH8P55286 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH8P55286 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms