Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLCSP50747 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLCSP50747 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.68■□□□□ 0.1
HLCSP50747 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.68■□□□□ 0.1
HLCSP50747 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 EGFEM1P-202ENST00000431685 1563 ntBASIC15.68■□□□□ 0.1
HLCSP50747 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 AC004967.1-201ENST00000453589 447 ntBASIC15.68■□□□□ 0.1
HLCSP50747 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.68■□□□□ 0.1
HLCSP50747 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.68■□□□□ 0.1
HLCSP50747 AC079781.4-201ENST00000641908 219 ntBASIC15.68■□□□□ 0.1
HLCSP50747 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.68■□□□□ 0.1
HLCSP50747 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.67■□□□□ 0.1
HLCSP50747 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HLCSP50747 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 MKNK2P1-201ENST00000437526 628 ntBASIC15.67■□□□□ 0.1
HLCSP50747 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.67■□□□□ 0.1
HLCSP50747 AC074386.1-202ENST00000463561 864 ntBASIC15.67■□□□□ 0.1
HLCSP50747 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
HLCSP50747 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.67■□□□□ 0.1
HLCSP50747 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.67■□□□□ 0.1
HLCSP50747 ACTL9-202ENST00000612068 1252 ntBASIC15.67■□□□□ 0.1
HLCSP50747 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 AC134684.3-201ENST00000641758 218 ntBASIC15.67■□□□□ 0.1
HLCSP50747 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.67■□□□□ 0.1
HLCSP50747 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HLCSP50747 AL645728.1-201ENST00000366221 2101 ntBASIC15.67■□□□□ 0.1
HLCSP50747 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLCSP50747 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.67■□□□□ 0.1
HLCSP50747 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.66■□□□□ 0.1
HLCSP50747 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
HLCSP50747 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLCSP50747 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HLCSP50747 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.66■□□□□ 0.1
HLCSP50747 FAM45BP-202ENST00000592932 1624 ntBASIC15.66■□□□□ 0.1
HLCSP50747 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
HLCSP50747 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.66■□□□□ 0.1
HLCSP50747 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLCSP50747 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms