Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 AC099522.2-201ENST00000607001 744 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 REXO1L8P-201ENST00000604378 1897 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 U82695.1-201ENST00000635752 1889 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 AC011270.2-201ENST00000624293 2550 ntBASIC14.57□□□□□ -0.08
CSNK1A1P48729 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 MTDHP5-201ENST00000598980 586 ntBASIC14.57□□□□□ -0.08
CSNK1A1P48729 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1A1P48729 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1A1P48729 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 YBX2P1-201ENST00000394192 760 ntBASIC14.56□□□□□ -0.08
CSNK1A1P48729 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 PRYP6-201ENST00000514804 343 ntBASIC14.56□□□□□ -0.08
CSNK1A1P48729 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 AL671883.3-201ENST00000603274 991 ntBASIC14.56□□□□□ -0.08
CSNK1A1P48729 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms