Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KIAA1549Q9HCM3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 AP005018.1-201ENST00000525475 301 ntBASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 AL589739.1-201ENST00000607720 493 ntBASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KIAA1549Q9HCM3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KIAA1549Q9HCM3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.46□□□□□ -0.1
KIAA1549Q9HCM3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
KIAA1549Q9HCM3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.46□□□□□ -0.1
KIAA1549Q9HCM3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.46□□□□□ -0.1
KIAA1549Q9HCM3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
KIAA1549Q9HCM3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 AC009407.1-201ENST00000568958 598 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 SPDYE22P-201ENST00000582158 798 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 AC239800.4-201ENST00000603712 296 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 AC025048.6-201ENST00000634326 1161 ntBASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KIAA1549Q9HCM3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms