Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN18Q99952 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN18Q99952 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC093433.1-201ENST00000458048 571 ntBASIC18.48■□□□□ 0.55
PTPN18Q99952 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AP002490.2-201ENST00000524791 560 ntBASIC18.48■□□□□ 0.55
PTPN18Q99952 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC079316.1-201ENST00000548397 411 ntBASIC18.48■□□□□ 0.55
PTPN18Q99952 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN18Q99952 AC008687.7-202ENST00000637404 953 ntBASIC18.48■□□□□ 0.55
PTPN18Q99952 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN18Q99952 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN18Q99952 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN18Q99952 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN18Q99952 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN18Q99952 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN18Q99952 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN18Q99952 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PTPN18Q99952 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN18Q99952 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN18Q99952 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 MIR326-201ENST00000362220 95 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AC004987.2-201ENST00000395959 1148 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 TOMM22P5-201ENST00000416399 439 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN18Q99952 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PTPN18Q99952 FAM86HP-204ENST00000513466 959 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.47■□□□□ 0.55
PTPN18Q99952 KRT90P-201ENST00000549264 1064 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AC120045.2-201ENST00000567334 178 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.47■□□□□ 0.55
PTPN18Q99952 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PTPN18Q99952 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AL021578.1-201ENST00000613646 709 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 AC005252.2-201ENST00000624630 1141 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 RHOXF1P1-202ENST00000635473 501 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 PP12613-201ENST00000424958 2230 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN18Q99952 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN18Q99952 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PTPN18Q99952 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN18Q99952 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN18Q99952 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.47■□□□□ 0.55
PTPN18Q99952 AC006538.1-201ENST00000567905 1585 ntBASIC18.47■□□□□ 0.55
PTPN18Q99952 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN18Q99952 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN18Q99952 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN18Q99952 C1QBPP1-201ENST00000400117 770 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms