Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 RN7SL219P-201ENST00000582872 296 ntBASIC19.61■□□□□ 0.73
SNED1Q8TER0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 AC005915.1-201ENST00000624912 2018 ntBASIC19.61■□□□□ 0.73
SNED1Q8TER0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 LETM1P2-201ENST00000597330 2178 ntBASIC19.61■□□□□ 0.73
SNED1Q8TER0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 MIR1247-201ENST00000408206 136 ntBASIC19.6■□□□□ 0.73
SNED1Q8TER0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 C2orf69P2-201ENST00000562032 1123 ntBASIC19.6■□□□□ 0.73
SNED1Q8TER0 CLUHP6-201ENST00000580789 941 ntBASIC19.6■□□□□ 0.73
SNED1Q8TER0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 AC133539.2-201ENST00000604757 467 ntBASIC19.6■□□□□ 0.73
SNED1Q8TER0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 MSTO2P-201ENST00000314835 1709 ntBASIC19.6■□□□□ 0.73
SNED1Q8TER0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.6■□□□□ 0.73
SNED1Q8TER0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNED1Q8TER0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.6■□□□□ 0.73
SNED1Q8TER0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 TOMM22P5-201ENST00000416399 439 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 BCRP2-202ENST00000447763 634 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 BCRP6-201ENST00000510112 632 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 BCRP7-201ENST00000511549 544 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNED1Q8TER0 HAUS4P1-201ENST00000406739 1145 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 KRT18P64-201ENST00000434946 1219 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 AC007551.1-201ENST00000457394 519 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 FTH1P14-201ENST00000482930 551 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 AC106760.1-201ENST00000508690 800 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 KRT90P-201ENST00000549264 1064 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.59■□□□□ 0.73
SNED1Q8TER0 AC068587.10-201ENST00000641210 219 ntBASIC19.59■□□□□ 0.73
SNED1Q8TER0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms