Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
MSH5O43196 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC22.79■■□□□ 1.24
MSH5O43196 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 AC079776.2-201ENST00000641154 1609 ntBASIC22.79■■□□□ 1.24
MSH5O43196 SDHAP2-201ENST00000455183 2001 ntBASIC22.79■■□□□ 1.24
MSH5O43196 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 AC123912.3-201ENST00000600907 1367 ntBASIC22.79■■□□□ 1.24
MSH5O43196 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
MSH5O43196 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC22.79■■□□□ 1.24
MSH5O43196 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 Y_RNA.110-201ENST00000363220 99 ntBASIC22.79■■□□□ 1.24
MSH5O43196 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.79■■□□□ 1.24
MSH5O43196 AC073621.1-201ENST00000392730 636 ntBASIC22.79■■□□□ 1.24
MSH5O43196 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC22.79■■□□□ 1.24
MSH5O43196 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.79■■□□□ 1.24
MSH5O43196 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.79■■□□□ 1.24
MSH5O43196 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.79■■□□□ 1.24
MSH5O43196 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC22.79■■□□□ 1.24
MSH5O43196 HLA-J-203ENST00000494367 1087 ntBASIC22.79■■□□□ 1.24
MSH5O43196 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC22.79■■□□□ 1.24
MSH5O43196 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.79■■□□□ 1.24
MSH5O43196 MIR4751-201ENST00000578027 74 ntBASIC22.79■■□□□ 1.24
MSH5O43196 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC22.79■■□□□ 1.24
MSH5O43196 AL513190.1-201ENST00000621254 727 ntBASIC22.79■■□□□ 1.24
MSH5O43196 AC093028.1-201ENST00000622998 982 ntBASIC22.79■■□□□ 1.24
MSH5O43196 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
MSH5O43196 AC006116.8-202ENST00000587620 1550 ntBASIC22.79■■□□□ 1.24
MSH5O43196 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC22.79■■□□□ 1.24
MSH5O43196 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
MSH5O43196 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
MSH5O43196 AL136379.1-201ENST00000623471 2642 ntBASIC22.78■■□□□ 1.24
MSH5O43196 FRMD6-AS1-201ENST00000617151 2229 ntBASIC22.78■■□□□ 1.24
MSH5O43196 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
MSH5O43196 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
MSH5O43196 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 MORF4L1P6-201ENST00000418771 268 ntBASIC22.78■■□□□ 1.24
MSH5O43196 SEPT7P6-201ENST00000469999 1143 ntBASIC22.78■■□□□ 1.24
MSH5O43196 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC22.78■■□□□ 1.24
MSH5O43196 AC112698.1-201ENST00000510299 916 ntBASIC22.78■■□□□ 1.24
MSH5O43196 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.78■■□□□ 1.24
MSH5O43196 MTCO1P4-201ENST00000520516 1409 ntBASIC22.78■■□□□ 1.24
MSH5O43196 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC22.78■■□□□ 1.24
MSH5O43196 SPCS2P1-201ENST00000561636 679 ntBASIC22.78■■□□□ 1.24
MSH5O43196 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC22.78■■□□□ 1.24
MSH5O43196 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC22.78■■□□□ 1.24
MSH5O43196 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 AF186192.2-204ENST00000581667 524 ntBASIC22.78■■□□□ 1.24
MSH5O43196 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.78■■□□□ 1.24
MSH5O43196 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC22.78■■□□□ 1.24
MSH5O43196 AC019226.1-201ENST00000625666 515 ntBASIC22.78■■□□□ 1.24
MSH5O43196 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
MSH5O43196 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSH5O43196 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
MSH5O43196 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
MSH5O43196 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
MSH5O43196 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
MSH5O43196 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.77■■□□□ 1.24
MSH5O43196 RPL30P16-201ENST00000419341 429 ntBASIC22.77■■□□□ 1.24
MSH5O43196 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 GYG1P1-201ENST00000460864 698 ntBASIC22.77■■□□□ 1.24
MSH5O43196 AL158068.1-201ENST00000506116 616 ntBASIC22.77■■□□□ 1.24
MSH5O43196 AF213884.2-201ENST00000510417 903 ntBASIC22.77■■□□□ 1.24
MSH5O43196 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC22.77■■□□□ 1.24
MSH5O43196 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.77■■□□□ 1.24
MSH5O43196 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.77■■□□□ 1.24
MSH5O43196 MIR4719-201ENST00000585233 84 ntBASIC22.77■■□□□ 1.24
MSH5O43196 AC013400.1-201ENST00000607190 545 ntBASIC22.77■■□□□ 1.24
MSH5O43196 AL137796.1-201ENST00000608190 577 ntBASIC22.77■■□□□ 1.24
MSH5O43196 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC22.77■■□□□ 1.24
MSH5O43196 AL356863.1-201ENST00000623378 1080 ntBASIC22.77■■□□□ 1.24
MSH5O43196 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 CES3-203ENST00000543856 3178 ntTSL 2 BASIC22.77■■□□□ 1.24
MSH5O43196 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
MSH5O43196 PCDHB17P-201ENST00000539533 2393 ntBASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms