Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.37□□□□□ -0.11
Nr1i3O35627 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Gm15376-201ENSMUST00000122258 783 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Gm15487-201ENSMUST00000122373 465 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Gm24694-201ENSMUST00000180054 110 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Gm27663-201ENSMUST00000184839 110 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nr1i3O35627 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1i3O35627 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.36□□□□□ -0.11
Nr1i3O35627 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nr1i3O35627 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.35□□□□□ -0.11
Nr1i3O35627 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.35□□□□□ -0.11
Nr1i3O35627 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.35□□□□□ -0.11
Nr1i3O35627 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Mir6956-201ENSMUST00000183598 62 ntBASIC14.35□□□□□ -0.11
Nr1i3O35627 Mir8102-201ENSMUST00000184148 139 ntBASIC14.35□□□□□ -0.11
Nr1i3O35627 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nr1i3O35627 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nr1i3O35627 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nr1i3O35627 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1i3O35627 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.34□□□□□ -0.11
Nr1i3O35627 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nr1i3O35627 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.34□□□□□ -0.11
Nr1i3O35627 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Nr1i3O35627 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nr1i3O35627 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.34□□□□□ -0.11
Nr1i3O35627 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nr1i3O35627 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.34□□□□□ -0.11
Nr1i3O35627 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.34□□□□□ -0.11
Nr1i3O35627 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms