Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 AL691432.1-201ENST00000596308 1422 ntBASIC14.27□□□□□ -0.12
MBD3L3A6NE82 CU639417.3-201ENST00000624240 1404 ntBASIC14.27□□□□□ -0.12
MBD3L3A6NE82 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 MEP1AP4-201ENST00000423244 1087 ntBASIC14.27□□□□□ -0.13
MBD3L3A6NE82 EEF1DP4-201ENST00000446006 880 ntBASIC14.27□□□□□ -0.13
MBD3L3A6NE82 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 AC055876.2-201ENST00000531834 546 ntBASIC14.27□□□□□ -0.13
MBD3L3A6NE82 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 AC025048.3-201ENST00000590609 569 ntBASIC14.27□□□□□ -0.13
MBD3L3A6NE82 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 AC005702.4-201ENST00000618393 416 ntBASIC14.27□□□□□ -0.13
MBD3L3A6NE82 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.27□□□□□ -0.13
MBD3L3A6NE82 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 AC092337.1-201ENST00000568699 1129 ntBASIC14.26□□□□□ -0.13
MBD3L3A6NE82 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 AC106886.4-201ENST00000623557 2502 ntBASIC14.26□□□□□ -0.13
MBD3L3A6NE82 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L3A6NE82 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 ME2P1-201ENST00000426028 1970 ntBASIC14.25□□□□□ -0.13
MBD3L3A6NE82 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 REXO1L8P-201ENST00000604378 1897 ntBASIC14.25□□□□□ -0.13
MBD3L3A6NE82 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms