Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.46■□□□□ 0.07
Rtn1Q8K0T0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn1Q8K0T0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn1Q8K0T0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Gm12138-201ENSMUST00000122180 951 ntBASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn1Q8K0T0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Gm11918-201ENSMUST00000121660 179 ntBASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Gm9794-201ENSMUST00000202370 423 ntBASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Gm44044-201ENSMUST00000205178 1089 ntBASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn1Q8K0T0 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 154.4 ms