Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cd40P27512 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cd40P27512 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.1□□□□□ -0.47
Cd40P27512 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Cd40P27512 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.1□□□□□ -0.47
Cd40P27512 Gm8463-201ENSMUST00000208573 613 ntBASIC12.1□□□□□ -0.47
Cd40P27512 Gm45384-201ENSMUST00000210451 277 ntBASIC12.1□□□□□ -0.47
Cd40P27512 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.1□□□□□ -0.47
Cd40P27512 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.1□□□□□ -0.47
Cd40P27512 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cd40P27512 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.1□□□□□ -0.47
Cd40P27512 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cd40P27512 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cd40P27512 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cd40P27512 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cd40P27512 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cd40P27512 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.09□□□□□ -0.47
Cd40P27512 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Cd40P27512 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.09□□□□□ -0.47
Cd40P27512 Gm6152-201ENSMUST00000151704 340 ntBASIC12.09□□□□□ -0.47
Cd40P27512 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cd40P27512 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.09□□□□□ -0.47
Cd40P27512 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.09□□□□□ -0.47
Cd40P27512 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.09□□□□□ -0.47
Cd40P27512 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.09□□□□□ -0.47
Cd40P27512 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cd40P27512 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.09□□□□□ -0.47
Cd40P27512 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40P27512 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cd40P27512 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cd40P27512 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cd40P27512 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd40P27512 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd40P27512 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cd40P27512 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cd40P27512 Gm6447-201ENSMUST00000118905 835 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cd40P27512 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cd40P27512 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40P27512 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Gm9794-201ENSMUST00000202370 423 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd40P27512 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.08□□□□□ -0.48
Cd40P27512 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms